NCKU EE 教師個人頁面
English Version
吳謂勝 教授
地址
電機系館8樓92803室
TEL
+886-6-2757575 ext.62426
實驗室網站連結
計算系統生物學實驗室
(R92879/ext.62400-1479)
學經歷
學歷
2007
清大電機系博士
2000
清大電機系碩士
1998
清大電機系學士
經歷
2014/11/07-2016/11/07
台灣演化與計算生物學會第二屆理事
2014/07 & 2015/07
海德堡大學IWR交流訪問
2013/08-now
國立成功大學電機工程學系控制組副教授
2011-2013
國立成功大學合作社理事
2009/02-2013/07
國立成功大學電機工程學系控制組助理教授
2007/10-2009/01
芝加哥大學生態與演化學系李文雄院士實驗室博士後研究員
2004/01 & 2014/08
芝加哥大學生態與演化學系李文雄院士實驗室訪問學生
2000/08-2001/07
國立清華大學電機工程學系專任助教
研究領域
  • 計算系統生物學
  • 計算轉錄體學
  • 計算微核糖核酸體學
  • 計算蛋白體學
  • 生物資料庫及生物伺服器建立
  • 癌症化療藥物副作用預測分析
著作
期刊論文( Journal )
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  1. Lai F, Chang JS, Wu WS* (2010 Dec.): Identifying a transcription factor's regulatory targets from its binding targets. Gene Regulation and Systems Biology, 4:125-133. (NSC-099-2628-B-006-015-MY3)
  2. Wu WS* (2011 Jan.): Different functional gene clusters in yeast have different spatial distribution of the transcription factor binding sites. Bioinformatics and Biology Insights, 5:1-11. (NSC-099-2628-B-006-015-MY3)
  3. Chang DTH, Huang CY, Wu CY, Wu WS* (2011 Jan.): YPA: an integrated repository of promoter features in Saccharomyces cerevisiae. Nucl. Acids Res., 39(1):D647-D652. (NSC-099-2628-B-006-015-MY3)Featured article in NAR (represents the top 5% of NAR papers in terms of originality, significance and scientific excel
  4. Wu WS* (2011 June): A quantitative robustness measure for gene regulatory networks. International Journal of Computational Intelligence in Control, 3(1):1-8. (Invited paper) (NSC-099-2628-B-006-015-MY3)
  5. Wang H, Wang YH, Wu WS* (2011 Oct.): Yeast cell cycle transcription factors identification by variable selection criteria. Gene, 485:172-176. (NSC-099-2628-B-006-015-MY3) SCI, impact factor=2.416, Ranking 53% (78/146) in Genetics & Heredity
  6. Yang TH, Wu WS* (2012 Aug.): Identifying biologically interpretable transcription factor knockout targets by jointly analyzing the transcription factor knockout microarray and the ChIP-chip data. BMC Systems Biology, 6:102. (NSC-099-2628-B-006-015-MY3) SCI, impact factor=3.15, Ranking 9% (4/47) in Mathematical
  7. Chang DTH, Li WS, Bai YH, Wu WS* (2012 Dec.): YGA: identifying distinct biological features between yeast gene sets. Gene, 518:26-34. (NSC-099-2628-B-006-015-MY3) SCI, impact factor=2.341, Ranking 53% (78/146) in Genetics & Heredity
  8. Xu SSD, Ying H, Carbonell P, Lee CH, Wu WS (2013 May): Fuzzy logic application in control theory and systems biology. Advances in Fuzzy Systems, vol. 2013, Article ID 504728, 1 page, 2013.
  9. Wang H, Chiu CC, Wu YC, Wu WS* (2013 Dec.): Shrinkage regression-based methods for microarray missing value imputation. BMC Systems Biology, 7(Suppl 6):S11. SCI, impact factor=2.982, Ranking 15% (7/47) in Mathematical & Computational Biology
  10. Chiu CC, Chan SY, Wang CC, Wu WS* (2013 Dec.): Missing value imputation for microarray data: a comprehensive comparison study and a web tool. BMC Systems Biology, 7(Suppl 6):S12.SCI, impact factor=2.982, Ranking 15% (7/47) in Mathematical & Computational Biology 
  11. Yang TH, Wu WS* (2013 Dec.): Inferring functional transcription factor-gene binding pairs by integrating transcription factor binding data with transcription factor knockout data. BMC Systems Biology, 7(Suppl 6):S13.SCI, impact factor=2.982, Ranking 15% (7/47) in Mathematical & Computational Biology 
  12. Lai FJ, Chiu CC, Yang TH, Huang YM, Wu WS* (2013 Dec.): Identifying functional transcriptional factor binding sites in yeast by considering their positional preference in the promoters. PLOS ONE, 8(12):e83791. SCI, impact factor=3.73, Ranking 13% (7/56) in Multidisciplinary Sciences
  13. Yang TH, Wang CC, Wang YC, Wu WS* (2014 Mar.): YTRP: a repository for yeast transcriptional regulatory pathways. Database, vol. 2014, Article ID bau014. SCI, 2013impact factor=4.457, Ranking 10% (5/52) in Mathematical & Computational Biology
  14. Yang TH, Chang HT, Hsiao ESL, Sun JL, Wang CC, Wu HY, Liao PC*, Wu WS* (2014 Dec.): iPhos: toolkit to streamline the alkaline phosphatase assisted comprehensive LC-MS phosphorproteome investigation. BMC Bioinformatics, 15(Suppl 16):S10. SCI, 2013impact factor=2.672, Ranking 15% (8/52) in Mathematical & Comput
  15. Yang TH, Wang CC, Hung PC, Wu WS* (2014 Dec.): cisMEP: an integrated repository of genomic epigenetic profiles and cis-regulatory modules in Drosophila. BMC Systems Biology, 8(Suppl 4):S8.
  16. Hung PC, Yang TH, Liaw HJ*, Wu WS* (2014 Dec.): YNA: an integrative gene mining platform for studying chromatin structure and its regulation in Yeast. BMC Genomics, 15(Suppl 9):S5.
  17. Lai FJ, Chang HT, Huang YM, Wu WS* (2014 Dec.): A comprehensive performance evaluation on the prediction results of existing cooperative transcription factors identification algorithms. BMC Systems Biology, 8(Suppl 4):S9.SCI, 2013impact factor=2.853, Ranking 13% (7/52) in Mathematical & Computational Biology
  18. Lai FJ, Jhu MH, Chiu CC, Huang YM, Wu WS* (2014 Dec.): Identifying cooperative transcription factors in yeast using multiple data sources. BMC Systems Biology, 8(Suppl 5):S2.SCI, 2013impact factor=2.853, Ranking 13% (7/52) in Mathematical & Computational Biology
  19. Wu WS, Wei ML, Yeh CM, DTH Chang* (2014 Dec.): A regulatory similarity measure using the location information of transcription factor binding sites in Saccharomyces cerevisiae. BMC Systems Biology, 8(Suppl 5):S9.SCI, 2013impact factor=2.853, Ranking 13% (7/52) in Mathematical & Computational Biology xx.Juang J
會議論文( Conference )
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  1. Wang H, Chiu CC, Wu YC, Wu WS* (2013 Dec.): Shrinkage regression-based methods for microarray missing value imputation. In The 24rd International Conference on Genome Informatics (GIW): Biopolis, Singapore. (Oral) 
  2. Chiu CC, Chan SY, Wang CC, Wu WS* (2013 Dec.): Missing value imputation for microarray data: a comprehensive comparison study and a web tool. In The 24rd International Conference on Genome Informatics (GIW): Biopolis, Singapore. (Oral) 
  3. Yang TH, Wu WS* (2013 Dec.): Inferring functional transcription factor-gene binding pairs by integrating transcription factor binding data with transcription factor knockout data. In The 24rd International Conference on Genome Informatics (GIW): Biopolis, Singapore. (Oral)
  4. Chang DTH, Yeh CM, Wei ML, Wu WS* (2014 June): A metric for computing regulatory similarity of two genes. In The 11th IEEE International Conference on Control & Automation (ICCA): Taichung, Taiwan. (Invited talk)
  5. Chiu CC, Wu WS* (2014 June): IMDE: an easy-to-use web server for missing data estimation. In The 11th IEEE International Conference on Control & Automation (ICCA): Taichung, Taiwan. (Invited talk)
  6. Yang TH, Chang HT, Hsiao ESL, Sun JL, Wang CC, Wu HY, Liao PC*, Wu WS* (2014 July): iPhos: toolkit to streamline the alkaline phosphatase assisted comprehensive LC-MS phosphorproteome investigation. In The 13th International Conference on Bioinformatics (InCoB): Sydney, A
  7. Yang TH, Wang CC, Hung PC, Wu WS* (2014 July): cisMEP: an integrated repository of genomic epigenetic profiles and cis-regulatory modules in Drosophila. In The 13th International Conference on Bioinformatics (InCoB): Sydney, Australia. (Oral) 
  8. Hung PC, Yang TH, Liaw HJ*, Wu WS* (2014 July): YNA: an integrative gene mining platform for studying chromatin structure and its regulation in Yeast. In The 13th International Conference on Bioinformatics (InCoB): Sydney, Australia. (Oral)
  9. Lai FJ, Chang HT, Huang YM, Wu WS* (2014 July): A comprehensive performance evaluation on the prediction results of existing cooperative transcription factors identification algorithms. In The 13th International Conference on Bioinformatics (InCoB): Sydney, Australia. (Or
  10. Wu WS, Wei ML, Yeh CM, DTH Chang* (2014 Dec.): A regulatory similarity measure using the location information of transcription factor binding sites in Saccharomyces cerevisiae. In The 24rd International Conference on Genome Informatics (GIW): Tokyo, Japan. (Oral) 
  11. Lai FJ, Jhu MH, Chiu CC, Huang YM, Wu WS* (2014 Dec.): Identifying cooperative transcription factors in yeast using multiple data sources. In The 24rd International Conference on Genome Informatics (GIW): Tokyo, Japan. (Oral) 
專利
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其他
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  1. 關於本人更詳盡的資訊請見http://myweb.ncku.edu.tw/~wessonwu/wessonwu.htm
其他
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less
  1. 關於本人更詳盡的資訊請見http://myweb.ncku.edu.tw/~wessonwu/wessonwu.htm
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研究計劃
  1. 用計算方法重建酵母菌適應環境壓力的基因調控網路及其演化過程
  2. 發展基因調控網路之強健性度量
  3. 研究酵母菌促進子的特性及其對轉錄調控的影響
  4. 解決轉錄體學及蛋白體學高通量實驗資料之缺值問題:提出新的缺值填補演算法、發展全面的效能比較平台及建置易用的網頁伺服器
開授課程
指導學生
本學年度 實驗室成員
博士班
邱家軍
碩士班
張哲偉
侯尚緯
張哲瑋
張永謚
陳品翰
陳宗德
江宇軒
杜灝平
黃偉哲
王啟睿
已畢業學生
博士班
103
賴福柔
102
楊子賢
碩士班
104
周孟諄   王語琤   謝彥宸   ?博文
103
張宏存
102
魏旻良   王鐘慶   洪柏丞
101
朱美惠   葉嘉銘   詹士瑤
100
李文僖
98
徐少梅
特殊榮譽
  1. (2015)  我們的五篇研究被GIW/InCoB2015接受口頭報告並轉投到BMC系列期刊 (本實驗室為GIW/InCoB2015中單一實驗室被接受最多文章者)。
  2. (2015)  國立成功大學電資學院明日之星獎助計畫。
  3. (2015)  德國海德堡大學跨領域科學計算中心訪問學者一個月(July)
  4. (2014)  德國海德堡大學跨領域科學計算中心訪問學者一個月(July)
  5. (2014)  我們的兩篇研究被GIW2014接受口頭報告並轉投到BMC Systems Biology (本實驗室為GIW2014中單一實驗室被接受最多文章者)。
  6. (2014)  我們的四篇研究被InCoB2014接受口頭報告並轉投到BMC系列期刊 (本實驗室為InCoB2014中單一實驗室被接受最多文章者)。
  7. (2014)  科技部及國立成功大學補助教師出國參加研討會經費 (放棄沒用)。
  8. (2014)  國立成功大學電資學院研究扶植計畫。
  9. (2014)  國立成功大學電資學院高品質、高排名論文獎助計畫。
  10. (2014)  國立成功大學電資學院明日之星獎助計畫。
  11. (2013)  我們的三篇研究被GIW2013接受口頭報告並轉投到BMC Systems Biology (本實驗室為GIW2013中單一實驗室被接受最多文章者)。
  12. (2012)  我們的一篇研究被GIW2012接受口頭報告並轉投到Gene。
  13. (2012)  ISEGB2012 invited talk。
  14. (2011)  我們的研究被ICSB2011從733篇投稿摘要中選為103位演講者之一,在三百多位聽眾面前發表我們的研究。
  15. (2011)  我們的酵母菌啟動子資料庫(http://ypa.ee.ncku.edu.tw)被選為Nucleic Acids Research期刊的featured article。
  16. (2010)  SiPS2010 invited talk。
  17. (2010) 國科會傑出學者養成計畫(個別型)三年期。
  18. (2009) 台灣生物資訊與系統生物學研討會,壁報論文競賽優等獎。
  19. (2007) 國科會菁英留學獎學金 (Postdoctoral Research Abroad Program Fellowship)
  20. (2001) 美國 UC Berkeley, UCSB, UCLA, Purdue, U of Michigan 等知名學府之 EECS博士班入學資格。
  21. (2000) 斐陶斐榮譽會員  (Phi Tau Phi Scholastic Honor Society)
  22. (2000) 潘文淵獎學金      (Pan Wen-yuan Memorial Scholarship)
  23. (1999) 國際航電獎學金 (GARMIN Corporation’s Scholarship)
  24. (1997) 嚴慶齡獎學金     (Yen Tjing Ling Industrial Development Foundation’s Scholarship)
  25. (1996) 周桐甫獎學金
  26. (1994) 周桐甫獎學金